Extra: Bioperl

Bioperl is needed to create the images of the sequence features. We plan to substitute the Bioperl dependency soon, but at the moment, to get nice pictures you need to install the following packages (on Debian):

apt-get install perl bzip2 unzip curl libconfig-ini-simple-perl libgd-gd2-perl

Then as root execute the following:

cd $TMP
rm -rf BioPerl-1.6.0.tar.gz BioPerl-1.6.0
wget http://bioperl.org/DIST/BioPerl-1.6.0.tar.gz
tar zxvf BioPerl-1.6.0.tar.gz
cd BioPerl-1.6.0
perl Makefile.PL
make
make install
rm -rf Bio-Graphics-1.93.tar.gz Bio-Graphics
wget http://search.cpan.org/CPAN/authors/id/L/LD/LDS/Bio-Graphics-1.93.tar.gz
tar zxvf Bio-Graphics-1.93.tar.gz
cd Bio-Graphics-1.93
perl Makefile.PL
make
make install