biosql sources are not searchable using the search box

[jprocter]

Unlike the demo site, biosql datasources do not appear to be searchable using the search box.

See e.g. :  http://p4bdemo.biodec.com/search?SearchableText=histone

[ivan]

The database I was working with is a small eukaryote - it only has 9000 sequences.

[jprocter]

Instructions on  http://www.plone4bio.org/trac/wiki/DBReindexing are clear and understandable (I would never have worked that out without delving much deeper into the zope management interface).

Indexing took less than one minute and around 1G on our machine using 1 core (operton, database is postgres 8 on a similar box) - not a serious load, but it would be better if indexing could be scheduled as an incremental task.

However, only the BioEntry? id and description appear to be indexed - at the very least, all associated text (accessions, literature references, etc) should also be indexed.

[ivan]

Replying to jprocter:

Instructions on  http://www.plone4bio.org/trac/wiki/DBReindexing are clear and understandable (I would never have worked that out without delving much deeper into the zope management interface).

Good. going to close the ticket.

Indexing took less than one minute and around 1G on our machine using 1 core (operton, database is postgres 8 on a similar box) - not a serious load, but it would be better if indexing could be scheduled as an incremental task.

see #13

However, only the BioEntry? id and description appear to be indexed - at the very least, all associated text (accessions, literature references, etc) should also be indexed.

see #12