Changeset 12 for plone4bio.base/trunk

Timestamp:

02/16/08 10:58:27 (4 years ago)

Author:

mauro

Message:

 

Files:

• plone4bio.base/trunk/plone4bio/base/README.txt (modified) (2 diffs)

plone4bio.base/trunk/plone4bio/base/README.txt

@@ -21 +21 @@
 interface defined in the *plone4bio.base* package.
 
+Creating a sequence
+-------------------
+
+Let us create some sequences.
+
+        >>> self.setRoles(('Manager',))
+        >>> self.portal.invokeFactory('Sequence','ferritin')
+        'ferritin'
+        >>> ferritin = getattr(self.portal,'ferritin')
+        
+The Sequence objects are simple Zope 3-like persistent content items.. so we 
+will configure the project using theirs properties.
+
+        >>> ferritin.title = u"Ferritin"
+        >>> ferritin.descritpion = u"Ferritin sequence"
+        >>> ferritin.sequence = u"CMSPDQWDKEAAQYDAHAQEFEKKSHRNNGTPEADQYRHMASQYQAMAQKLKAIANQLKKGSETCR"
+        
+Now we can read some sequence properties:
+
+        >>> ferritin.getSeqObj()
+        ....
+        >>> ferritin.getPredictions()
+        []
+        >>> ferritin.havePrediction("predictor")
+        False
+        
 Developer Notes
 ---------------
@@ -26 +52 @@
 The plone4bio* plone products are mainly developed on Debian Stable, so
 they are mainly tested in that environment. Usually there should be no
-problem in installing the products in GNU/Linux Zope/Plone environments.
+problem in installing the products in other Zope/Plone environments.
 
 Maintainer